Quick picks bioi
- Inferring transcriptional module networks from ChIP-chip-, motif- and microarray data (Genome Biology, 2006, Highly Accessed Paper)
- Estimating the tempo and mode of gene family evolution from comparative genomic data (Genome research, 2005)
- CAFE: Computational Analysis of gene Family
Evolutions
Download the tool
Read the papers:
here (Bioinformatics, 2006)
and
here (Genome Research, 2005)
Quick picks machine learning
- Fast SDP relaxations of graph cut clustering, transduction, and other combinatorial problems (JMLR, 2006)
- Tutorial talk: kernel methods tutorial (slides)
- Tutorial paper: Eigenproblems in pattern recognition (including PCA, CCA, PLS, spectral clustering)
- Convex methods for transduction (NIPS, 2004)